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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs4143924 chr14:66791137 C/A ATP6V1D chr14:67761088-67826982:- 0.43 7.63 1.28E-13 Box Plot
THCA rs41441744 chr22:32656561 C/T C22orf39 chr22:19338891-19435755:- -0.54 -5.88 7.93E-9 Box Plot
THCA rs41441744 chr22:32656561 C/T C22orf40 chr22:46639911-46646193:- -0.56 -7.33 9.94E-13 Box Plot
THCA rs41441744 chr22:32656561 C/T C22orf46 chr22:42084943-42094140:+ -0.68 -5.89 7.49E-9 Box Plot
THCA rs41441744 chr22:32656561 C/T EIF3D chr22:36906897-36925483:- -0.57 -6.75 4.38E-11 Box Plot
THCA rs41441744 chr22:32656561 C/T EIF3L chr22:38244875-38285414:+ -0.57 -5.93 5.85E-9 Box Plot
THCA rs41441744 chr22:32656561 C/T GGA1 chr22:38004482-38029571:+ -0.57 -6.4 3.73E-10 Box Plot
THCA rs41441744 chr22:32656561 C/T HSCB chr22:29138019-29153503:+ -0.5 -6 3.93E-9 Box Plot
THCA rs41441744 chr22:32656561 C/T KLHL22 chr22:20795806-20850170:- -0.6 -6.6 1.09E-10 Box Plot
THCA rs41441744 chr22:32656561 C/T LZTR1 chr22:21333751-21353327:+ -0.6 -6.59 1.17E-10 Box Plot
THCA rs41441744 chr22:32656561 C/T NDUFA6 chr22:42481529-42486959:- -0.54 -6.54 1.57E-10 Box Plot
THCA rs41441744 chr22:32656561 C/T NIPSNAP1 chr22:29950797-29977326:- -0.75 -6.73 4.92E-11 Box Plot
THCA rs41441744 chr22:32656561 C/T NOL12 chr22:38077680-38089485:+ -0.51 -7.22 2.0E-12 Box Plot
THCA rs41441744 chr22:32656561 C/T PICK1 chr22:38452318-38471708:+ -0.53 -5.88 7.71E-9 Box Plot
THCA rs41441744 chr22:32656561 C/T POLR2F chr22:38348614-38437922:+ -0.45 -6.09 2.26E-9 Box Plot